LncRNA Information
ID EL0508 Name BCAR4 Aliases N/A
Species Homo sapiens Chromosome 16 Start site 11819830
End site 11828832 Chain minus Exon NO. 5
Assembly GRCh38.p13 Class lincRNA NCBI accession NR_131216, NR_131222, NR_024050, NR_131217, NR_024049
Ensembl ENSG00000262117 Sequence NR_131216 NR_131222 NR_024050 NR_131217 NR_024049 Peptide-related N/A
CircRNA N/A Exosomal yes Structure N/A


Disease
Disease Drug/chemo/stress Method Sample Expression pattern Dysfunction type Description PMID
osteosarcoma RNA purification assay osteosarcoma tissues up-regulated interaction Functional experiments demonstrated that knockdown of BCAR4 inhibits the proliferation and migration of osteosarcoma cell in vitro.Consistently, knockdown of BCAR4 inhibits osteosarcoma tumorigenesis and lung metastasis in vivo. 27460090
colorectal cancer qRT-PCR, western blot, luciferase reporter assay, overexpression, colon cancer stem/initiating cells (CSC) , ALDH+ cells up-regulated interaction LncRNA BCAR4, targeting to miR-665/STAT3 signaling, maintains cancer stem cells stemness and promotes tumorigenicity in colorectal cancer. 30962766
glioma knockdown, overexpression glioma tissues, glioma cells up-regulated interaction Long noncoding RNA BCAR4 promotes glioma cell proliferation via EGFR/PI3K/AKT signaling pathway. 31173355
glioma qRT-PCR, western blot, knockdown, Luciferase reporter assays, RNA pull-down, graded gliomas Specimens, glioblastoma (GBM) cell lines up-regulated interaction Long Non-Coding RNA BCAR4 Promotes Growth, Invasion and Tumorigenicity by Targeting miR-2276 to Upregulate MMP7 Expression in Glioma 31849498
bladder cancer knockdown, BC tissues compared with matched healthy tissues. up-regulated interaction lncRNA BCAR4 sponges miR‑370‑3p to promote bladder cancer progression via Wnt signaling. 31894304
bladder cancer qRT-PCR, knockdown bladder cancer cell lines up-regulated interaction BCAR4 sponged miR-644a to modulate the expression of TLX1 and promote bladder cancer development. 32273720
liver cancer knockdown, overexpression Huh‑7 cells up-regulated interaction LncRNA BCAR4 may promote liver cancer development by directly binding to miR‑1261 and targeting ANAPC11. 32319544
breast cancer qRT-PCR cell line (ZR-75-1) up-regulated N/A Breast cancer anti-estrogen resistance 4 (BCAR4), caused OH-TAM resistance and anchorage-independent cell growth in ZR-75-1 cells. 16778085
breast cancer qRT-PCR, western blot cell lines (ZR-75-1, BCAR3, EGFR etc.) up-regulated expression High BCAR4 mRNA levels were associated with poor MFS and overall survival, reflecting tumour aggressiveness. 20859285
breast cancer qRT-PCR cell line (ZR-75-1) up-regulated expression BCAR4 is expressed in 27% of primary breast tumors. Forced expression of BCAR4 in human ZR-75-1 and MCF7 breast cancer cells resulted in cell proliferation in the absence of estrogen and in the presence of various antiestrogens.BCAR4 may be a good target for treating antiestrogen-resistant breast cancer. 21506106
breast cancer microarray, qRT-PCR, knockdown cell lines (ZR-75-1, MCF7, BCAR4 etc.) differential expression expression BCAR4 induces antioestrogen resistance but sensitises breast cancer to lapatinib. 22892392
breast cancer N/A N/A N/A N/A BCAR4 binding of SNIP1 and PNUTS in response to CCL21 releases the SNIP1's inhibition of p300-dependent histone acetylation, which in turn enables the BCAR4-recruited PNUTS to bind H3K18ac and relieve inhibition of RNA Pol II via activation of the PP1 phosphatase. 25416949
colorectal cancer qRT-PCR expression The combination of two mRNAs, KRTAP5-4 and MAGEA3, and one lncRNA, BCAR4, could be potential candidates to detect colorectal cancer. 27197301
osteosarcoma qRT-PCR osteosarcoma tissues and cell lines, normal controls. up-regulated expression The BCAR4 levels were significantly correlated with clinical stage and distant metastasis. 27874956
non-small cell lung cancer qRT-PCR NSCLC tissues and their adjacent non-tumor tissues, NSCLC cell lines up-regulated expression The upregulation of lncRNA BCAR4 expression plays a promoting role in the malignant progression of NSCLC 28077810
chondrosarcoma qRT-PCR, western blot, overexpression, knockdown chondrosarcoma tissues and cells, Chondrosarcoma xenograft mouse model up-regulated expression LncRNA BCAR4 promoted chondrosarcoma cell proliferation and migration through activation of mTOR signaling pathway, and thus contributed to chondrosarcoma progression. 28399646
non-small cell lung cancer qRT-PCR, knockdown, western blotting,immunofluorescence assay 76 pairs of NSCLC tissues and corresponding cancer-adjacent tissues and 6 NSCLC cell lines, Metastatic tumor model of nude mice up-regulated expression BCAR4 promotes the invasion and metastasis of NSCLC via regulating EMT and BCAR4/EMT interaction can be used as a new target for the diagnosis and therapeutics of NSCLC. 28537678
colon cancer expression LncRNA BCAR4 promotes colon cancer progression via activating Wnt/β-catenin signaling. 29190958
cervical cancer qRT-PCR, knockdown, overexpression, cervical cancer tissue and cell lines up-regulated expression The results indicated that BCAR4 might play a crucial role in cervical cancer progression and act as an underlying biomarker for the diagnosis and prognosis of cervical cancer. 29937186
hepatocellular carcinoma qRT-PCR, HCC tissues down-regulated expression Development of a GeXP-Based Multiplex RT-PCR Assay for Detection of Long Noncoding RNA in Hepatocellular Carcinoma. 30423146
castration-resistant prostate cancer overexpression CRPC, compared to normal prostate tissue up-regulated expression BCAR4 activates GLI2 signaling in prostate cancer to contribute to castration resistance. 30513511
gastric cancer qRT-PCR, western blot, overexpression GC cell lines and tissues up-regulated expression Over-expression of lncRNA BCAR4 promoted cell proliferation and suppressed cell apoptosis in vitro and promoted tumor formation in vivo. 32329841


Interaction
Interaction target Level of interaction Type of interaction Methods Description PMID
EGFR RNA-Protein regulation N/A we uncovered that BCAR4 activated PI3K/AKT signaling pathway in glioma through upregulating EGFR and interacting with it. 31173355
IL6 RNA-DNA regulation N/A BCAR4 physically associates with the promoters of GLI2 target genes RPS3, IL6, MUC5AC, and TGF-β1. 27460090
miR-1261 RNA-RNA binding N/A LncRNA BCAR4 was demonstrated to directly bind to microRNA (miR)‑1261 32319544
miR-2276 RNA-RNA binding western blot we found that BCAR4 could act as a competing endogenous RNA (ceRNA) by targeting miR-2276 to upregulate MMP7 expression. 31849498
miR-370-3p RNA-RNA binding N/A BCAR4 directly sponged microRNA (miR)‑370‑3p and elevated Wnt7a expression. 31894304
miR-644a RNA-RNA binding N/A Mechanically, we showed that BCAR4 can bind to miR-644a directly and targets TLX1. 32273720
miR-665 RNA-TF binding western blot, luciferase reporter assay MiR-665 was the target of BCAR4 and subsequently activated signal transducers and STAT3 signaling which is an important pathway in cancer stem cells self-renewal. 30962766
MUC5AC RNA-DNA regulation N/A BCAR4 physically associates with the promoters of GLI2 target genes RPS3, IL6, MUC5AC, and TGF-β1. 27460090
RPS3 RNA-DNA regulation N/A BCAR4 physically associates with the promoters of GLI2 target genes RPS3, IL6, MUC5AC, and TGF-β1. 27460090
TGF-β1 RNA-DNA regulation N/A BCAR4 physically associates with the promoters of GLI2 target genes RPS3, IL6, MUC5AC, and TGF-β1. 27460090
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