| LncRNA Information | ||||||
|---|---|---|---|---|---|---|
| ID | EL1300 | Name | TCONS_00053930 | Aliases | N/A | |
| Species | Populus tomentosa | Chromosome | N/A | Start site | N/A | |
| End site | N/A | Chain | N/A | Exon NO. | N/A | |
| Assembly | N/A | Class | lincRNA | NCBI accession | N/A | |
| Ensembl | N/A | Sequence | N/A | |||
| Function (not disease relevant) | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Methods | Sample/condition | Expression pattern | Dysfunction type | Description | PMID | Source | |||
| RNA-seq/qRT-PCR | wood formation | up-regulated | N/A | Another target gene( POPTR_0001s07400.1), predicted to be targeted by TCONS_00053930, encodes a protein similar to 4CL, the central enzyme of the plant-specific phenylpropanoid pathway, which has an important role in lignin biosynthesis (Table 3). | 25230698 | PLNlncRbase | |||
| Interaction | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Interaction target | Level of interaction | Type of interaction | Description | PMID | Source | ||||
| POPTR_0001s07400.1 | RNA-DNA | regulation | Another target gene, predicted to be targeted by TCONS_00053930, encodes a protein similar to 4CL | 25230698 | PLNlncRbase | ||||