LncRNA Information
ID EL0289 Name CDKN2B-AS1 Aliases ANRIL; CDKN2B-AS; CDKN2BAS; NCRNA00089; PCAT12; p15AS
Species Homo sapiens Chromosome 9 Start site 21994778
End site 22121097 Chain plus Exon NO. 21
Assembly Ensembl Release 89 Class antisense NCBI accession NR_003529, NR_047532, NR_047543, NR_047535, NR_047537, NR_047534, NR_047536, NR_047538, NR_120536, N
Ensembl ENSG00000240498 Sequence


Disease
Disease Method Sample Expression pattern Dysfunction type Description PMID Source
acute lymphoblastic leukemia MassARRAY assay etc. acute lymphoblastic leukemia tissue differential expression mutation rs564398 (A>G), mapping to the CDKN2BAS locus that encodes for ANRIL antisense non-coding RNA, showed a statistically significant correlation with the ALL phenotype, with a risk pattern that was compatible with an overdominant model of disease susceptibility. 21414664 LncRNADisease Lnc2Cancer
neurofibromatosis type 1 microarray, qPCR etc. blood up-regulated mutation Single-nucleotide polymorphism rs2151280 (C>T, located in ANRIL) was statistically significantly associated with the number of PNFs (P < .001) in NF1 patients. In addition, allele T of rs2151280 was statistically significantly associated with reduced ANRIL transcript levels (P < .001), suggesting that modulation of ANRIL expression mediates PNF susceptibility. 22034633 LncRNADisease Lnc2Cancer
type 2 diabetes mellitus N/A N/A N/A mutation Susceptibility to coronary artery disease and diabetes is encoded by distinct, tightly linked SNPs (rs2891168, A>G) in the ANRIL locus on chromosome 9p. 18048406 LncRNADisease
acute lymphoblastic leukemia N/A N/A N/A expression Higher p15AS levels were often found in acute lymphoblastic (ALL) and myeloid leukemias (AML). 21874119 LncRNADisease
acute myocardial infarction N/A N/A N/A N/A Level of ANRIL was lower in patients with MI (P=0.003)Patients with ST-segment-elevation MI had lower level of ANRIL (P<0.001)when compared with patients with non-ST-segment-elevation MI. 25035150 LncRNADisease
melanoma N/A N/A N/A mutation Association identified by GWAS. 17440112 LncRNADisease Lnc2Cancer
type 2 diabetes mellitus N/A N/A N/A mutation Recent studies showed that single nucleotide polymorphisms (rs3217992, A>G;rs1063192, C>T) mapping in the vicinity of ANRIL are linked to a wide spectrum of conditions, including cardiovascular disease, ischemic stroke, type 2 diabetes, frailty and Alzheimer's disease. 17463248 LncRNADisease
type 2 diabetes mellitus N/A N/A N/A mutation Association identified by GWAS. 17463249 LncRNADisease
myocardial infarction N/A N/A N/A mutation Association identified by GWAS. 17478679 LncRNADisease
coronary disease N/A N/A N/A mutation Association identified by GWAS (rs10757274, A>G;rs2383206, A>G). 17478681 LncRNADisease
coronary artery disease N/A N/A N/A mutation Sequence polymorphisms in a 58-kilobase (kb) interval on chromosome 9p21 confer a markedly increased risk (rs3217992, A>G;rs1063192, C>T) of coronary artery disease (CAD), the leading cause of death worldwide. 17554300 LncRNADisease
coronary artery disease N/A N/A N/A mutation Susceptibility to coronary artery disease and diabetes is encoded by distinct, tightly linked SNPs (rs2891168, A>G) in the ANRIL locus on chromosome 9p. 18048406 LncRNADisease
Alzheimer's disease N/A N/A N/A mutation Recent studies showed that single nucleotide polymorphisms (rs3217992, A>G;rs1063192, C>T) mapping in the vicinity of ANRIL are linked to a wide spectrum of conditions, including cardiovascular disease, ischemic stroke, type 2 diabetes, frailty and Alzheimer's disease. 18761660 LncRNADisease
intracranial aneurism N/A N/A N/A mutation Association identified by GWAS (rs1333040, C>T). 18997786 LncRNADisease
myocardial infarction N/A N/A N/A mutation association identified by GWAS (rs4977574, A>G). 19198609 LncRNADisease
coronary disease N/A N/A N/A locus CHD and periodontitis are genetically related by at least one susceptibility locus, which is possibly involved in ANRIL activity and independent of diabetes associated risk variants within this region. Elucidation of the interplay of ANRIL transcript variants and their involvement in increased susceptibility to the interactive diseases CHD and periodontitis promises new insight into the underlying shared pathogenic mechanisms of these complex common diseases. 19214202 LncRNADisease
periodontitis N/A N/A N/A locus CHD and periodontitis are genetically related by at least one susceptibility locus, which is possibly involved in ANRIL activity and independent of diabetes associated risk variants within this region. Elucidation of the interplay of ANRIL transcript variants and their involvement in increased susceptibility to the interactive diseases CHD and periodontitis promises new insight into the underlying shared pathogenic mechanisms of these complex common diseases. 19214202 LncRNADisease
atherosclerosis N/A N/A N/A mutation Genotypes of rs10757278 linked to increased risk of atherosclerotic diseases are also associated with decreased expression in PBTL of the INK4/ARF locus, near CDKN2B-AS1 locus. 19343170 LncRNADisease
aortic aneurysm N/A N/A N/A expression Significantly reduced expression of all INK4/ARF transcripts (p15(INK4b), p16(INK4a), ARF and ANRIL) was found in PBTL of individuals harboring a common SNP (rs10757278) associated with increased risk of coronary artery disease, stroke and aortic aneurysm. 19343170 LncRNADisease
coronary artery disease N/A N/A N/A expression Significantly reduced expression of all INK4/ARF transcripts (p15(INK4b), p16(INK4a), ARF and ANRIL) was found in PBTL of individuals harboring a common SNP (rs10757278) associated with increased risk of coronary artery disease, stroke and aortic aneurysm. 19343170 LncRNADisease
Stroke N/A N/A N/A expression Significantly reduced expression of all INK4/ARF transcripts (p15(INK4b), p16(INK4a), ARF and ANRIL) was found in PBTL of individuals harboring a common SNP (rs10757278) associated with increased risk of coronary artery disease, stroke and aortic aneurysm. 19343170 LncRNADisease
glioma N/A N/A N/A mutation Variants (rs1412829, C>T) in the CDKN2B and RTEL1 regions are associated with high-grade glioma susceptibility. 19578366 LncRNADisease
glioma N/A N/A N/A mutation Association identified by GWAS. 19578367 LncRNADisease
atherosclerosis N/A N/A N/A expression 9p21.3 may promote atherosclerosis by regulating expression of ANRIL, which in turn is associated with altered expression of genes controlling cellular proliferation pathways. 19592466 LncRNADisease
coronary artery disease N/A N/A N/A expression Whole blood RNA expression of the short variants of ANRIL was increased by 2.2-fold whereas expression of the long ANRIL variant was decreased by 1.2-fold in healthy subjects homozygous for the risk allele. Expression levels of the long and short ANRIL variants were positively correlated with that of the cyclin-dependent kinase inhibitor, CDKN2B (p15) and TDGF1 (Cripto), respectively. 19592466 LncRNADisease
atherosclerosis N/A N/A N/A mutation/expression Transcripts EU741058 and NR_003529 of antisense noncoding RNA in the INK4 locus (ANRIL) were significantly increased in carriers of the risk haplotype. 20056914 LncRNADisease
intracranial aneurism N/A N/A N/A locus We also confirmed prior associations near CDKN2A-CDKN2B locus. 20364137 LncRNADisease
coronary disease N/A N/A N/A mutation Risk SNPs (rs3217992, A>G;rs1063192, C>T) for coronary disease, stroke, diabetes, melanoma, and glioma were all associated with allelic expression of ANRIL. 20386740 LncRNADisease Lnc2Cancer
Stroke N/A N/A N/A mutation Risk SNPs (rs3217992, A>G;rs1063192, C>T) for coronary disease, stroke, diabetes, melanoma, and glioma were all associated with allelic expression of ANRIL. 20386740 LncRNADisease Lnc2Cancer
type 2 diabetes mellitus N/A N/A N/A mutation Risk SNPs (rs3217992, A>G;rs1063192, C>T) for coronary disease, stroke, diabetes, melanoma, and glioma were all associated with allelic expression of ANRIL. 20386740 LncRNADisease Lnc2Cancer
familial and sporadic intracranial aneurysms N/A N/A N/A mutation All 6 index cases from IA families had the rs1333040-T allele (C>T) in CDKN2BAS. 20395613 LncRNADisease
breast cancer N/A N/A N/A locus A locus associated with breast cancer. 20453838 LncRNADisease
nasopharyngeal carcinoma N/A N/A N/A mutation A SNP rs1412829 (C49137T) at CDKN2A-CDKN2B gene cluster on 9p21 is associated with this disease. 20512145 LncRNADisease
endometriosis N/A N/A N/A mutation The authors identified a significant association of endometriosis with rs10965235 (A>C, P = 5.57 x 10(-12), odds ratio = 1.44), which is located in CDKN2BAS on chromosome 9p21, encoding the cyclin-dependent kinase inhibitor 2B antisense RNA.the SNP showing the strongest association was located in intron 16 of CDKN2BAS and was implicated in regulating the expression of p15, p16 and p14. 20601957 LncRNADisease
atherosclerosis N/A N/A N/A Interaction ANRIL abundantly expressed in atherosclerotic lesions. ANRIL DQ485454 which is not genetically determined by the 9p21 genotype was significantly correlated with MTAP expression. 20637465 LncRNADisease
cardiovascular disease N/A N/A N/A mutation Recent studies showed that single nucleotide polymorphisms (rs3217992, A>G;rs1063192, C>T) mapping in the vicinity of ANRIL are linked to a wide spectrum of conditions, including cardiovascular disease, ischemic stroke, type 2 diabetes, frailty and Alzheimer's disease. 20716961 LncRNADisease
basal cell carcinoma N/A N/A N/A mutation More recent GWAS also identified ANRIL as a risk locus (rs3217992, A>G;rs1063192, C>T) for gliomas and basal cell carcinomas in accordance with the princeps observation. 20956613 LncRNADisease
breast cancer N/A N/A N/A mutation More recently, additional GWAS identified ANRIL as a risk locus (rs3217992, A>G;rs1063192, C>T) for several cancers including breast cancer, nasopharyngeal carcinoma, basal cell carcinoma, and glioma. 20956613 LncRNADisease
coronary disease N/A N/A N/A mutation Common disease genome wide association studies (GWAS) have surprisingly identified the ANRIL gene as a genetic susceptibility locus (rs3217992, A>G;rs1063192, C>T) shared associated by coronary disease, intracranial aneurysm and also type 2 diabetes. 20956613 LncRNADisease
glioma N/A N/A N/A mutation More recent GWAS also identified ANRIL as a risk locus (rs3217992, A>G;rs1063192, C>T) for gliomas and basal cell carcinomas in accordance with the princeps observation. 20956613 LncRNADisease
intracranial aneurism N/A N/A N/A mutation Common disease genomewide association studies (GWAS) have surprisingly identified the ANRIL gene as a genetic susceptibility locus (rs3217992, A>G;rs1063192, C>T)shared associated by coronary disease, intracranial aneurysm and also type 2 diabetes. 20956613 LncRNADisease
nasopharyngeal carcinoma N/A N/A N/A mutation More recently, additional GWAS identified ANRIL as a risk locus (rs3217992, A>G;rs1063192, C>T) for several cancers including breast cancer, nasopharyngeal carcinoma, basal cell carcinoma, and glioma. 20956613 LncRNADisease
type 2 diabetes mellitus N/A N/A N/A mutation Common disease genomewide association studies (GWAS) have surprisingly identified the ANRIL gene as a genetic susceptibility locus (rs3217992, A>G;rs1063192, C>T) shared associated by coronary disease, intracranial aneurysm and also type 2 diabetes. 20956613 LncRNADisease
atherosclerosis N/A N/A N/A locus A genetic susceptibility locus. 20956613 LncRNADisease
basal cell carcinoma N/A N/A N/A locus A genetic susceptibility locus. 20956613 LncRNADisease
breast cancer N/A N/A N/A locus A genetic susceptibility locus. 20956613 LncRNADisease
coronary disease N/A N/A N/A locus A genetic susceptibility locus 20956613 LncRNADisease
glioma N/A N/A N/A locus A genetic susceptibility locus. 20956613 LncRNADisease
intracranial aneurism N/A N/A N/A locus A genetic susceptibility locus. 20956613 LncRNADisease
melanoma N/A N/A N/A locus A genetic susceptibility locus. 20956613 LncRNADisease
nasopharyngeal carcinoma N/A N/A N/A locus A genetic susceptibility locus. 20956613 LncRNADisease
type 2 diabetes mellitus N/A N/A N/A locus A genetic susceptibility locus. 20956613 LncRNADisease
abdominal aortic aneurysm N/A N/A N/A mutation Genetic risk (rs10757278, A>G) for abdominal aortic aneurysm. 21146954 LncRNADisease
cancer N/A N/A N/A Interaction RNA immunoprecipitation demonstrates that ANRIL binds to SUZ12 in vivo. Collectively, these results suggest a model in which ANRIL binds to and recruits PRC2 to repress the expression of p15(INK4B) locus. 21151178 LncRNADisease
atherosclerosis N/A N/A N/A mutation Individuals homozygous for the atherosclerotic risk allele (rs3217992, A>G;rs1063192, C>T) show decreased expression of ANRIL. 21151960 LncRNADisease
glaucoma N/A N/A N/A mutation Genome-wide association study identifies susceptibility loci for open angle glaucoma at TMCO1 and CDKN2B-AS1 (rs4977756, A>G). 21532571 LncRNADisease
atherosclerosis N/A N/A N/A expression Gene expression studies have found that expression levels of CDKN2A/CDKN2B/ANRIL are co-regulated and associated with the risk haplotype and atherosclerosis severity. 21550161 LncRNADisease
melanoma N/A N/A N/A mutation A large germline deletion (403231 bp) encompassing the INK4/ARF locus and the ANRIL lncRNA has been associated with hereditary cutaneous malignant melanoma (CMM) and neural system tumors (NST) syndrome. 21550244 LncRNADisease
neural system tumors syndrome N/A N/A N/A mutation A large germline deletion (403231 bp) encompassing the INK4/ARF locus and the ANRIL lncRNA has been associated with hereditary cutaneous malignant melanoma (CMM) and neural system tumors (NST) syndrome. 21550244 LncRNADisease
Stroke N/A N/A N/A mutation Variants (rs3217992, A>G;rs1063192, C>T) on chromosome 9p21.3 correlated with ANRIL expression contribute to stroke risk and recurrence in a large prospective stroke population. 22034006 LncRNADisease
peripheral artery disease N/A N/A N/A mutation SNP rs2383207 on ANRIL was most significantly associated with lower ABI. 22122968 LncRNADisease
atherosclerosis N/A N/A N/A mutation The risk alleles for atherosclerosis-related phenotypes were consistently associated with a lower expression of ANRIL when evaluating exons 1-2. Common carotid artery stenosis was associated with a significantly lower (P<0.01) expression of ANRIL (exons 1-2). ANRIL knock-down in VSMC caused significant variation in expression of CDKN2A/B (P<0.05) and reduction of cell growth (P<0.05) in vitro. 22178423 LncRNADisease
glioma N/A N/A N/A mutation Moreover, genome-wide association studies have demonstrated that the 9p21 genomic locus is a hotspot for the risk of stroke, glioma, plexiform neurofibroma and other disorders 22814587 LncRNADisease
plexiform neurofibroma N/A N/A N/A mutation Moreover, genome-wide association studies have demonstrated that the 9p21 genomic locus is a hotspot for the risk of stroke, glioma, plexiform neurofibroma and other disorders 22814587 LncRNADisease
Stroke N/A N/A N/A mutation Moreover, genome-wide association studies have demonstrated that the 9p21 genomic locus is a hotspot for the risk of stroke, glioma, plexiform neurofibroma and other disorders 22814587 LncRNADisease
acute lymphoblastic leukemia N/A N/A N/A expression Disruptions to the expression of ANRIL have accordingly been associated with the development of several cancer types, including neuroblastoma , acute lymphocytic leukaemia, melanoma and prostate 22817756 LncRNADisease
melanoma N/A N/A N/A expression Disruptions to the expression of ANRIL have accordingly been associated with the development of several cancer types, including neuroblastoma , acute lymphocytic leukaemia, melanoma and prostate 22817756 LncRNADisease
neuroblastoma N/A N/A N/A expression Disruptions to the expression of ANRIL have accordingly been associated with the development of several cancer types, including neuroblastoma , acute lymphocytic leukaemia, melanoma and prostate 22817756 LncRNADisease
prostate cancer N/A N/A N/A expression Disruptions to the expression of ANRIL have accordingly been associated with the development of several cancer types, including neuroblastoma , acute lymphocytic leukaemia, melanoma and prostate 22817756 LncRNADisease
Stroke N/A N/A N/A expression Genetic variants that affect the expression of the ANRIL transcript have been correlated with stroke risk and recurrence in a large prospective study 22817756 LncRNADisease
cancer N/A N/A N/A mutation Interestingly, genome wide association studies (GWAS) identified several variants in the intergenic region encompassing ANRIL to be associated with several diseases such as coronary heart disease, intracranial aneurysm, many type of cancers and T4D 22928560 LncRNADisease
coronary disease N/A N/A N/A mutation Interestingly, genome wide association studies (GWAS) identified several variants in the intergenic region encompassing ANRIL to be associated with several diseases such as coronary heart disease, intracranial aneurysm, many type of cancers and T2D 22928560 LncRNADisease
intracranial aneurism N/A N/A N/A mutation Interestingly, genome wide association studies (GWAS) identified several variants in the intergenic region encompassing ANRIL to be associated with several diseases such as coronary heart disease, intracranial aneurysm, many type of cancers and T3D 22928560 LncRNADisease
type 2 diabetes mellitus N/A N/A N/A mutation Interestingly, genome wide association studies (GWAS) identified several variants in the intergenic region encompassing ANRIL to be associated with several diseases such as coronary heart disease, intracranial aneurysm, many type of cancers and T5D 22928560 LncRNADisease
leukemia N/A N/A N/A regulation Gene silencing of INK4b-ARF-INK4a and p15/CDKN2B by recruitment of PRC1 and PRC2. 22996375 LncRNADisease
prostate cancer N/A N/A N/A regulation Gene silencing of INK4b-ARF-INK4a and p15/CDKN2B by recruitment of PRC1 and PRC2. 22996375 LncRNADisease
cancer N/A N/A N/A expression ANRIL is a recently discovered long non-coding RNA encoded in the chromosome 9p21 region. This locus is a hotspot for disease-associated polymorphisms, and it has been consistently associated with cardiovascular disease, and more recently with several cancers, diabetes, glaucoma, endometriosis among other conditions. 23104877 LncRNADisease
cardiovascular disease N/A N/A N/A expression ANRIL is a recently discovered long non-coding RNA encoded in the chromosome 9p21 region. This locus is a hotspot for disease-associated polymorphisms, and it has been consistently associated with cardiovascular disease, and more recently with several cancers, diabetes, glaucoma, endometriosis among other conditions. 23104877 LncRNADisease
coronary artery disease N/A N/A N/A expression However, overexpression of 1 ANRIL variant altered the expression of many genes involved in nuclear regulation and chromatin architecture, indicating diverse trans-regulatory effects that go beyond the cis-effects seen at 9p21. 23104877 LncRNADisease
diabetes mellitus N/A N/A N/A expression ANRIL is a recently discovered long non-coding RNA encoded in the chromosome 9p21 region. This locus is a hotspot for disease-associated polymorphisms, and it has been consistently associated with cardiovascular disease, and more recently with several cancers, diabetes, glaucoma, endometriosis among other conditions. 23104877 LncRNADisease
endometriosis N/A N/A N/A expression ANRIL is a recently discovered long non-coding RNA encoded in the chromosome 9p21 region. This locus is a hotspot for disease-associated polymorphisms, and it has been consistently associated with cardiovascular disease, and more recently with several cancers, diabetes, glaucoma, endometriosis among other conditions. 23104877 LncRNADisease
glaucoma N/A N/A N/A expression ANRIL is a recently discovered long non-coding RNA encoded in the chromosome 9p21 region. This locus is a hotspot for disease-associated polymorphisms, and it has been consistently associated with cardiovascular disease, and more recently with several cancers, diabetes, glaucoma, endometriosis among other conditions. 23104877 LncRNADisease
glaucoma N/A N/A N/A mutation CDKN2B-AS1 genotype-glaucoma feature correlations in primary open-angle glaucoma patients from the United States. 23111177 LncRNADisease
prostate cancer N/A N/A N/A expression ANRIL, also upregulated in prostate cancer, is required for the repression of the tumor suppressors INK4a/p16 and INK4b/p15. 23463798 LncRNADisease
cancer N/A N/A N/A expression Another lncRNA associated with human cancers is ANRIL, a long, antisense transcript found in the INK4a/Arf locus. ANRIL is overexpressed in human leukemias and prostate cancers, and its expression leads to epigenetic silencing of the nearby tumor suppressor p15 (Yu et al., 2008; Yap et al., 2010). 23473599 LncRNADisease
prostate cancer N/A N/A N/A expression Recent studies have linked their mis-expression to diverse cancers (ANRIL: prostate cancer, XIST: female cancers, HOTAIR: breast cancer, KCNQ1OT1: colorectal cancer). 23660942 LncRNADisease
Alzheimer's disease N/A N/A N/A mutation Genetic variation in lncRNA genes causes disease and influences susceptibility 23791884 LncRNADisease
atherosclerosis N/A N/A N/A mutation Genetic variation in lncRNA genes causes disease and influences susceptibility 23791884 LncRNADisease
diabetes mellitus N/A N/A N/A mutation Genetic variation in lncRNA genes causes disease and influences susceptibility 23791884 LncRNADisease
glaucoma N/A N/A N/A mutation Genetic variation in lncRNA genes causes disease and influences susceptibility 23791884 LncRNADisease
glioma N/A N/A N/A mutation Genetic variation in lncRNA genes causes disease and influences susceptibility 23791884 LncRNADisease
intracranial aneurism N/A N/A N/A mutation Genetic variation in lncRNA genes causes disease and influences susceptibility 23791884 LncRNADisease
plexiform neurofibroma N/A N/A N/A mutation Genetic variation in lncRNA genes causes disease and influences susceptibility 23791884 LncRNADisease
Stroke N/A N/A N/A mutation Genetic variation in lncRNA genes causes disease and influences susceptibility 23791884 LncRNADisease
atherosclerosis N/A N/A N/A regulation The large non-coding RNA ANRIL, which is associated with atherosclerosis, periodontitis and several forms of cancer, regulates ADIPOR1, VAMP3 and C11ORF10. 23813974 LncRNADisease
cancer N/A N/A N/A regulation The large non-coding RNA ANRIL, which is associated with atherosclerosis, periodontitis and several forms of cancer, regulates ADIPOR1, VAMP3 and C11ORF10. 23813974 LncRNADisease
periodontitis N/A N/A N/A regulation The large non-coding RNA ANRIL, which is associated with atherosclerosis, periodontitis and several forms of cancer, regulates ADIPOR1, VAMP3 and C11ORF10. 23813974 LncRNADisease
atherosclerosis N/A N/A N/A mutation Chr9p21 encodes the long non-coding RNA (ncRNA) antisense non-coding RNA in the INK4 locus (ANRIL). ANRIL expression is associated with the Chr9p21 genotype and correlated with atherosclerosis severity 23861667 LncRNADisease
cardiovascular disease N/A N/A N/A regulation Recently, ANRIL, a multi-exonic lncRNA, has been shown to be implicated in epigenetic modulation in cardiac development and adult heart and also it has been associated with a locus implicated in cardiovascular disease. 24113581 LncRNADisease
Stroke N/A N/A N/A expression Levels of CDKN2B-AS1/ANRIL in human carotid atherosclerotic plaques and peripheral blood T lymphocytes are linked to rates of ischemic and hemorrhagic stroke. 24145019 LncRNADisease
prostate cancer N/A N/A N/A regulation ANRIL is an antisense lncRNA elevated in PCa that overlaps this locus, interacting directly with polycomb repressive complex 1 and histone H3K27 methylation to repress CDKN2A-CDKN2B expression 24146262 LncRNADisease
ischemic stroke N/A N/A N/A regulation Regulation of CARD8 expression by ANRIL and association of CARD8 single nucleotide polymorphism rs2043211 (p.C10X) with ischemic stroke. 24385277 LncRNADisease
cardiovascular disease N/A N/A N/A mutation Aberrant ANRIL transcripts and mutations were associated with cardiovascular disease and cancer . 24531795 LncRNADisease
cardiovascular disease N/A N/A N/A mutation Aberrant ANRIL transcripts and mutations were associated with cardiovascular disease and cancer . 24531795 LncRNADisease
hereditary cutaneous malignant melanoma N/A N/A N/A N/A Long ncRNA antisense non-coding RNA in the INK4 locus (ANRIL) has been associated to hereditary cutaneous malignant melanoma, prostate cancer and tumors of the neural system (Pasmant et al., 2011). 24624135 LncRNADisease
prostate cancer N/A N/A N/A N/A Long ncRNA antisense non-coding RNA in the INK4 locus (ANRIL) has been associated to hereditary cutaneous malignant melanoma, prostate cancer and tumors of the neural system (Pasmant et al., 2011). 24624135 LncRNADisease
tumor N/A N/A N/A N/A Long ncRNA antisense non-coding RNA in the INK4 locus (ANRIL) has been associated to hereditary cutaneous malignant melanoma, prostate cancer and tumors of the neural system (Pasmant et al., 2011). 24624135 LncRNADisease
cancer N/A N/A N/A locus Furthermore, genome wide association studies have identified the ANRIL gene as a risk locus for coronary disease, intracranial aneurism, type 2 diabetes and several cancers including glioma. 24624135 LncRNADisease
coronary disease N/A N/A N/A locus Furthermore, genome wide association studies have identified the ANRIL gene as a risk locus for coronary disease, intracranial aneurism, type 2 diabetes and several cancers including glioma. 24624135 LncRNADisease
intracranial aneurism N/A N/A N/A locus Furthermore, genome wide association studies have identified the ANRIL gene as a risk locus for coronary disease, intracranial aneurism, type 2 diabetes and several cancers including glioma. 24624135 LncRNADisease
type 2 diabetes mellitus N/A N/A N/A locus Furthermore, genome wide association studies have identified the ANRIL gene as a risk locus for coronary disease, intracranial aneurism, type 2 diabetes and several cancers including glioma. 24624135 LncRNADisease
tumor N/A N/A N/A regulation ANRIL, GAS5 and lincRNA-p23 are involved in the escape of growth suppression by regulating tumor suppressor genes (ANRIL) or apoptosis regulators. 24667321 LncRNADisease
prostate cancer N/A N/A N/A expression ANRIL is upregulated in prostate cancer and is required for the repression of the tumor suppressors INK4a/p16 and INK4b/p15 (Yap et al., 2010; Kotake et al., 2011). 24721780 LncRNADisease
cancer N/A N/A N/A expression High expression of ANRIL has been found in certain cancer tissues such as melanoma and prostate cancers? 24757675 LncRNADisease
nasopharyngeal carcinoma N/A N/A N/A mutation In recent years, GWAS has identified ANRIL as a risk locus for NPC and other cancers. 24817925 LncRNADisease
cancer N/A N/A N/A regulation It has also been shown that the tumor suppressor gene p15 is silenced by its natural antisense RNA, a lncRNA ANRIL. 24829860 LncRNADisease
endometriosis N/A N/A N/A mutation Rs10965235 SNP in the CDKN2B-AS gene was significantly associated with endometriosis in this Korean population. 25154675 LncRNADisease
breast cancer qPCR etc. breast cancer tissue up-regulated expression Expression of ANRIL mainly coclustered with p14/ARF both in physiologic (various normal human tissues) and in pathologic conditions (human breast tumors). 17440112 LncRNADisease Lnc2Cancer
melanoma qPCR etc. melanoma tissue differential expression mutation Risk SNPs (rs3217992, A>G;rs1063192, C>T) for coronary disease, stroke, diabetes, melanoma, and glioma were all associated with allelic expression of ANRIL. 20386740 LncRNADisease Lnc2Cancer
glioma qPCR etc. glioma tissue differential expression mutation Risk SNPs (rs3217992, A>G;rs1063192, C>T) for coronary disease, stroke, diabetes, melanoma, and glioma were all associated with allelic expression of ANRIL. 20386740 LncRNADisease Lnc2Cancer
prostate cancer qPCR etc. cell lines (PC3, MEFs, IMR90 etc.) up-regulated Interaction Here we report that chromobox 7 (CBX7) within the polycomb repressive complex 1 binds to ANRIL, and both CBX7 and ANRIL are found at elevated levels in prostate cancer tissues. 20541999 LncRNADisease Lnc2Cancer
cervical cancer qPCR etc. cell line (CaSki) up-regulated expression Down-regulated in cells were incubated in the presence of BLM for 24 h or irradiated. 22487937 LncRNADisease Lnc2Cancer
laryngeal squamous cell carcinoma qPCR etc. LSCC tissue up-regulated expression We discovered that five lncRNAs were differentially expressed between primary LSCC samples and adjacent normal tissues. Among them, three lncRNAs were up-expressed in tumor specimens, including CDKN2B-AS1, HOTAIR and MALAT1. More, two lncRNAs had significant down-expression, which were lncRNA RRP1B and SRA1. Cisplatin and paclitaxel have target function on significant lncRNAs in LSCC, which presents novel molecular targets to cure LSCC patients and also leads an orientation for developing new drugs. 25257554 Lnc2Cancer
acute lymphoblastic leukemia qPCR, knockdown etc. cell lines (KG-1, Kasumi-1) up-regulated N/A We found an inverse relation between p15 antisense (p15AS) and p15 sense expression in leukaemia. A p15AS expression construct induced p15 silencing in cis and in trans through heterochromatin formation but not DNA methylation; the silencing persisted after p15AS was turned off, although methylation and heterochromatin inhibitors reversed this process. Moreover, 11 out of 16 patient samples (69%) showed relatively increased expression of p15AS and downregulated p15 expression (6/11 in acute myeloid leukaemia and 5/5 in acute lymphoblastic leukaemia). In contrast, 16 normal controls showed high expression of p15 but relatively low expression of the p15AS. Additionally, the two acute myeloid leukaemia lines, which displayed high p15AS and low p15 expression. 18185590 Lnc2Cancer
acute myeloid leukemia qPCR, knockdown etc. cell lines (KG-1, Kasumi-1) up-regulated N/A We found an inverse relation between p15 antisense (p15AS) and p15 sense expression in leukaemia. A p15AS expression construct induced p16 silencing in cis and in trans through heterochromatin formation but not DNA methylation; the silencing persisted aftp15AS was turned off, although methylation and heterochromatin inhibitors reversed this process. Moreover, 11 out of 16 patient samples (69%) showed relatively increased expression of p15AS and downregulated p15 expression (6/11 in acute myeloid leukaemia and 5/5 in acute lymphoblastic leukaemia). In contrast, 16 normal controls showed high expression of p15 but relatively low expression of the p15AS. Additionally, the two acute myeloid leukaemia lines, which displayed high p15AS and low p15 expression.on. 18185590 Lnc2Cancer
hepatocelluar carcinoma qPCR, knockdown etc. HCC tissue, cell lines ((HepG2 etc.) up-regulated expression LncRNA ANRIL expression in HCC tissues was significantly higher than in the adjacent non-tumor tissues (P < 0.05). The expression of lncRNA ANRIL was remarkably associated with the histologic grade and TNM stage of HCC patients (P < 0.05). In addition, HCC patients with higher lncRNA ANRIL expression had significantly poorer overall survival (P < 0.05).Moreover, in vitro assays revealed that the decreased expression of lncRNA ANRIL could suppress the cell proliferation, migration and invasion HCC cells. 26045820 Lnc2Cancer
cervical cancer qPCR, knockdown etc. cell lines (HeLa) up-regulated interaction qRT-PCR showed that ANRIL is highly expressed in these cancer cells compared to normal fibroblasts. Depletion of ANRIL increased p15 expression, with no impact on p16 or ARF (alternative reading frame) expression, and caused cell-cycle arrest at the G2/M phase, leading to inhibition of proliferation of H1299 and HeLa cells. 26408699 Lnc2Cancer
non-small cell lung cancer qPCR, knockdown etc. cell lines (ABC-1, H1299) up-regulated expression qRT-PCR showed that ANRIL is highly expressed in these cancer cells compared to normal fibroblasts. Depletion of ANRIL increased p15 expression, with no impact on p16 or ARF (alternative reading frame) expression, and caused cell-cycle arrest at the G2/M phase, leading to inhibition of proliferation of H1299 and HeLa cells. 26408699 Lnc2Cancer
osteosarcoma qPCR, knockdown etc. cell lines (Saos-2) up-regulated expression qRT-PCR showed that ANRIL is highly expressed in these cancer cells compared to normal fibroblasts. Depletion of ANRIL increased p15 expression, with no impact on p16 or ARF (alternative reading frame) expression, and caused cell-cycle arrest at the G2/M phase, leading to inhibition of proliferation of H1299 and HeLa cells. 26408699 Lnc2Cancer
non-small cell lung cancer qPCR, Western blot etc. NSCLC tissue, cell lines (PC9, SPC-A1, NCI-H1975, H1299, H358) up-regulated expression In this study, we reported that ANRIL expression was increased in NSCLC tissues and Its expression level was significantly correlated with TNM stages and tumor size. Moreover, patients with high levels of ANRIL expression had a relatively poor prognosis. In addition, taking advantage of loss of function experiments in NSCLC cells, we found that knockdown of ANRIL expression could impair cell proliferation and induce cell apoptosis both in vitro and vivo. 25504755 Lnc2Cancer
bladder cancer qPCR, Western blot etc. bladder cancer specimens and the corresponding adjacent non-tumor tissues up-regulated interaction Our results showed up-regulation of ANRIL in bladder cancer tissues versus the corresponding adjacent non-tumor tissues. Knockdown of ANRIL repressed cell proliferation and increased cell apoptosis, along with decreased expression of Bcl-2 and increased expressions of Bax, cytoplasmic cytochrome c and Smac and cleaved caspase-9, caspase-3 and PARP. 26449463 Lnc2Cancer
esophageal squamous cell carcinoma qPCR, Western blot, knockdown etc. ESCC tissue, cell lines (TE1, ECA109) up-regulated regulation ANRIL inhibits p15INK4b through the TGFβ1 signaling pathway in human esophageal squamous cell carcinoma. 24747824 LncRNADisease Lnc2Cancer
serous ovarian cancer qPCR, Western blot, knockdown etc. SOC tissue, cell lines (SK-OV-3, HO8910) up-regulated interaction We found that ANRIL levels were elevated in SOC tissues compared with normal controls and were highly correlated with advanced FIGO stage, high histological grade, lymph node metastasis, and poor prognosis. Functional studies suggest a critical role of ANRIL in the control of SOC cell migration/invasion at least in part through regulation of MET and MMP3. 25845387 Lnc2Cancer
gastric cancer qPCR, Western blot, knockdown, RIP etc. gastric cancer tissue, cell lines (SGC7901, BGC823, MGC803) up-regulated regulation Long noncoding RNA ANRIL indicates a poor prognosis of gastric cancer and promotes tumor growth by epigenetically silencing of miR-99a/miR-449a. 24810364 LncRNADisease Lnc2Cancer
hepatocelluar carcinoma qPCR, Western blot, knockdown, RIP etc. HCC tissue, cell lines (HepG2, Hep3B, MHCC-97H) up-regulated interaction ANRIL expression was up-regulated in HCC tissues, and the higher expression of ANRIL was significantly correlated with tumor size and Barcelona Clinic Liver Cancer (BCLC) stage. Moreover, taking advantage of loss of function experiments in HCC cells, we found that knockdown of ANRIL expression could impair cell proliferation and invasion and induce cell apoptosis both in vitro and in vivo. 25966845 Lnc2Cancer
non-small cell lung cancer qRT-PCR 87 NSCLC tissues and three lung cancer cell lines up-regulated expression The expression level of lncRNA ANRIL was higher in NSCLC tissues and lung cancer cells than in adjacent non-tumor tissues and normal human bronchial epithelial cells. Higher expression of lncRNA ANRIL in NSCLC tissues was associated with higher TNM stage and advanced lymph node metastasis. Our results suggested that lncRNA ANRIL was a potential biomarker for NSCLC prognosis. 25889788
non-small-cell lung cancer qRT-PCR patients suffering from non-small-cell lung cancer (NSCLC) up-regulated expression N/A 26448925
invasive breast carcinomas qRT-PCR and immunohistochemistry (IHC) invasive breast carcinomas N/A N/A N/A 27102007
gastric cancer silencing ; qRT-PCR and western blotting gastric cancer tissues of cisplatin-resistant and 5-fluorouracil (5-FU)-resistant patients up-regulated N/A ANRIL positively correlated with the expression in gastic cell; silencing ANRIL decreased the IC50 values in gastric cancer cells 27121324
 


Function (not disease relevant)
Methods Sample/condition Expression pattern Dysfunction type Description PMID Source
N/A N/A N/A mutation Recent studies showed that single nucleotide polymorphisms (rs3217992, A>G;rs1063192, C>T) mapping in the vicinity of ANRIL are linked to a wide spectrum of conditions, including cardiovascular disease, ischemic stroke, type 2 diabetes, frailty and Alzheimer's disease. 17459456 LncRNADisease
 


Interaction
Interaction target Level of interaction Type of interaction Description PMID Source
ARF RNA-DNA regulation Binding to RNA contributes to CBX7 function and disruption of either interaction impacts the ability of CBX7 to repress the INK4b/ARF/INK4a locus and control senescence. 20541999 LncRNADisease
INK4a RNA-DNA regulation Binding to RNA contributes to CBX7 function and disruption of either interaction impacts the ability of CBX7 to repress the INK4b/ARF/INK4a locus and control senescence. 20541999 LncRNADisease
INK4b RNA-DNA regulation Binding to RNA contributes to CBX7 function and disruption of either interaction impacts the ability of CBX7 to repress the INK4b/ARF/INK4a locus and control senescence. 20541999 LncRNADisease
CBX7 RNA-Protein binding Chromobox 7 (CBX7) within the polycomb repressive complex 1 (PRC1) binds to ANRIL. 20541999 LncRNADisease
CBX7 RNA-Protein binding Here we report that chromobox 7 (CBX7) within the polycomb repressive complex 1 binds to ANRIL, and both CBX7 and ANRIL are found at elevated levels in prostate cancer tissues. 20541999 LncRNADisease
PRC1 RNA-Protein binding Recruits Polycomb Repressor Complex 1 (PRC1) to epigenetically silence INK4b/ARF/INK4a tumour suppressor locus. 20541999 LncRNADisease
E2F1 DNA-TF regulation ANRIL is implicated in the regulation of nucleus and potential transcriptional target of E2F1. 20664976 LncRNADisease
CBX7 RNA-Protein binding Chromobox 7 (CBX7) within the polycomb repressive complex 1 (PRC1) has been shown to bind to ANRIL 20956613 LncRNADisease
p15 RNA-DNA regulation RNA immunoprecipitation demonstrates that ANRIL binds to SUZ12 in vivo. Collectively, these results suggest a model in which ANRIL binds to and recruits PRC2 to repress the expression of p15(INK4B) locus. 21151178 LncRNADisease
PRC2 RNA-Protein binding RNA immunoprecipitation demonstrates that ANRIL binds to SUZ12 in vivo. Collectively, these results suggest a model in which ANRIL binds to and recruits PRC2 to repress the expression of p15(INK4B) locus. 21151178 LncRNADisease
SUZ12 RNA-Protein binding RNA immunoprecipitation demonstrates that ANRIL binds to SUZ12 in vivo. Collectively, these results suggest a model in which ANRIL binds to and recruits PRC2 to repress the expression of p15(INK4B) locus. 21151178 LncRNADisease
PRC1 RNA-Protein binding Although lncRNA-mediated regulation of INK4b-ARF-INK4a gene is not restricted to ANRIL, both polycomb repressive complex-1 (PRC1) and -2 (PRC2) interact with ANRIL to form heterochromatin surrounding the INK4b-ARF-INK4a locus, leading to its repression. 21828241 LncRNADisease
PRC2 RNA-Protein binding Although lncRNA-mediated regulation of INK4b-ARF-INK4a gene is not restricted to ANRIL, both polycomb repressive complex-1 (PRC1) and -2 (PRC2) interact with ANRIL to form heterochromatin surrounding the INK4b-ARF-INK4a locus, leading to its repression. 21828241 LncRNADisease
PRC1 RNA-Protein binding Both polycomb repressive complex-1 (PRC1) and -2 (PRC2) interact with ANRIL to form heterochromatin surrounding the INK4b-ARF-INK4a locus, leading to its repression. 21828241 LncRNADisease
PRC2 RNA-Protein binding Both polycomb repressive complex-1 (PRC1) and -2 (PRC2) interact with ANRIL to form heterochromatin surrounding the INK4b-ARF-INK4a locus, leading to its repression. 21828241 LncRNADisease
PcG RNA-Protein binding PcG repress the expression of INK4b-ARF-INK4a locus by directly binding to the long noncoding RNA (lncRNA) transcript antisense noncoding RNA in the INK4 locus (ANRIL). 21828241 LncRNADisease
PcG RNA-Protein binding The important role of PcG in mediating repression of the INK4b-ARF-INK4a locus, by directly binding to the long noncoding RNA (lncRNA) transcript antisense noncoding RNA in the INK4 locus (ANRIL), was recently shown. 21828241 LncRNADisease
PRC1 RNA-Protein binding ANRIL (i.e.antisense ncRNA in INK4 locus) has also been linked to transcriptional repression via interaction with both PRC1 and PRC2. 21831473 LncRNADisease
PRC2 RNA-Protein binding ANRIL (i.e.antisense ncRNA in INK4 locus) has also been linked to transcriptional repression via interaction with both PRC1 and PRC2. 21831473 LncRNADisease
CBX7 RNA-Protein binding ANRIL was also found to coimmunoprecipitate with CBX7, which is component of the polycomb repressive complex 1 (PRC1). 21874119 LncRNADisease
Suz12 RNA-Protein binding ANRIL was found to co-immunoprecipitate with Suz12, which is component of PRC2. 21874119 LncRNADisease
p15INK4B RNA-RNA co-expression full-length ANRIL was shown to repress p15INK4B expression. Induction of p15INK4B and p16INK4A by oncogenic Ras was found to repress ANRIL expression. 21874119 LncRNADisease
p16INK4A RNA-RNA co-expression induction of p15INK4B and p16INK4A by oncogenic Ras was found to repress ANRIL expression. 21874119 LncRNADisease
PRC1 RNA-Protein binding Work over the past few years has demonstrated a direct interaction between ANRIL and components from both PRC1 and PRC2 complexes. Binding to ANRIL contributes to the functions of both PRC1 and PRC2 proteins, and disruption of either interaction impacts transcriptional repression of the target INK4b locus. 21925379 LncRNADisease
PRC2 RNA-Protein binding Work over the past few years has demonstrated a direct interaction between ANRIL and components from both PRC1 and PRC2 complexes. Binding to ANRIL contributes to the functions of both PRC1 and PRC2 proteins, and disruption of either interaction impacts transcriptional repression of the target INK4b locus. 21925379 LncRNADisease
Cisplatin and paclitaxel N/A regulation Cisplatin and paclitaxel have target function on significant lncRNAs in LSCC, which presents novel molecular targets to cure LSCC patients and also leads an orientation for developing new drugs. 25257554
KLF2 and P21 RNA-DNA regulation we uncover that ANRIL could not repress p15 expression in PC9 cells, but through silencing of KLF2 and P21 transcription. 25504755
MET and MMP3 RNA-DNA regulation we found that MET and MMP3 are key downstream genes of ANRIL involved in SOC cell migration/invasion. 25845387
KLF2 RNA-DNA binding We also found that ANRIL could epigenetically repress Kruppel-like factor 2 (KLF2) transcription in HCC cells by binding with PRC2 and recruiting it to the KLF2 promoter region. 25966845
p15 RNA-DNA regulation Depletion of ANRIL increased p15 expression, with no impact on p16 or ARF (alternative reading frame) expression, and caused cell-cycle arrest at the G2/M phase, leading to inhibition of proliferation of H1299 and HeLa cells. 26408699
Bcl-2, Bax, cytoplasmic cytochrome c and Smac and cleaved caspase-9, caspase-3 and PARP RNA-Protein regulation Knockdown of ANRIL repressed cell proliferation and increased cell apoptosis, along with decreased expression of Bcl-2 and increased expressions of Bax, cytoplasmic cytochrome c and Smac and cleaved caspase-9, caspase-3 and PARP. 26449463
p15/CDKN2Bp16/CDKN2A-p14/ARF RNA-Protein regulation These data demonstrate a complex pattern of interactions between lncRNA ANRIL, several miRNAs, PRC2/PRC1 subunits, and p15/CDKN2B-p16/CDKN2A-p14/ARF locus and suggest that their expression should be considered together to evaluate antitumoral drugs, in particular the BET bromodomain inhibitors. 27102007
MDR1 and MRP1 RNA-Protein co-expression The expression of ANRIL positively correlated with the expression of MDR1 and MRP1, resprectively 27121324