LncRNA Information | ||||||
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ID | EL0617 | Name | IPS1 | Aliases | N/A | |
Species | Vitis vinifera | Chromosome | N/A | Start site | N/A | |
End site | N/A | Chain | N/A | Exon NO. | N/A | |
Assembly | N/A | Class | lincRNA | NCBI accession | N/A | |
Ensembl | N/A | Sequence | N/A |
Function (not disease relevant) | |||||||||
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Methods | Sample/condition | Expression pattern | Dysfunction type | Description | PMID | Source | |||
Northern blot/qRT-PCR | phosphate balance | up-regulated | N/A | IPS1 RNA is not cleaved but instead sequesters miR-399. Thus, IPS1 overexpression results in increased accumulation of the miR-399 target PHO2 mRNA and, concomitantly, in reduced shoot Pi content5–8. Engineering of IPS1 to be cleavable abolishes its inhibitory activity on miR-399. | 17643101 | PLNlncRbase | |||
Interaction | |||||||||
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Interaction target | Level of interaction | Type of interaction | Description | PMID | Source | ||||
PHO2 | RNA-RNA | regulation | IPS1 overexpression results in increased accumulation of the miR-399 target PHO2 mRNA and, concomitantly, in reduced shoot Pi content. | 17643101 | PLNlncRbase | ||||