LncRNA Information
ID EL0602 Name HvCesA6 Aliases N/A
Species Hordeum vulgare Chromosome N/A Start site N/A
End site N/A Chain N/A Exon NO. N/A
Assembly N/A Class antisense NCBI accession N/A
Ensembl N/A Sequence N/A

Function (not disease relevant)
Methods Sample/condition Expression pattern Dysfunction type Description PMID Source
Strand-specific RT-PCR Cell-wall synthesis down-regulated N/A The increases in abundance of the CesA6 antisense transcript and the 21-nt and 24-nt siRNAs derived from the transcript are coincident with the down-regulation of primary wall CesAs, several Csl genes, and GT8 glycosyl transferase genes, and are correlated with the reduction in rates of cellulose and (1→3),(1→4)-β-D-glucan synthesis. The expression of individual members of the CesA/Csl superfamily and glycosyl transferases share common regulatory control points, and siRNAs from natural cis-antisense pairs derived from the CesA/Csl superfamily could function in this global regulation of cell-wall synthesis. 19075248 PLNlncRbase

Interaction target Level of interaction Type of interaction Description PMID Source
Csl genes, and GT8 glycosyl transferase genes RNA-DNA regulation Virus induced gene silencing using unique target sequences derived from HvCesA genes attenuated expression not only of the HvCesA6 gene, but also of numerous nontarget Csls and the distantly related GT8 genes and reduced the incorporation of D-(14)C-Glc into cellulose and into mixed-linkage (1 --> 3),(1 --> 4)-beta-D-glucans of the developing leaves. 19075248 PLNlncRbase