LncRNA Information
ID EL0574 Name Hm629797 Aliases Mrhl
Species Mus musculus Chromosome 8 Start site 85994245
End site 85996642 Chain plus Exon NO. N/A
Assembly Ensembl Release 89 Class sense intronic NCBI accession HM629797
Ensembl ENSMUSG00000098439 Sequence

Function (not disease relevant)
Methods Sample/condition Expression pattern Dysfunction type Description PMID Source
ChOP (Chromatin oligo affinity precipitation) mouse spermatogonial Gc1-Spg cells up-regulated expression Our findings in the Gc1-Spg cell line also correlate with the results from analysis of mouse testicular tissue which further highlights the in vivo physiological significance of mrhl RNA in the context of gene regulation during mammalian spermatogenesis. 25584904
N/A N/A N/A locus This meiotically active locus happens to be flanked by a transcribed region encoding a non-protein-coding rna polymerase ii transcript and the previously characterized repair site. 15169920

Interaction target Level of interaction Type of interaction Description PMID Source
Pc4, hnRNP A/B and hnRNP A2/B1 RNA-Protein binding We also identified interacting proteins of mrhl RNA associated chromatin fraction which included Pc4, a chromatin organizer protein and hnRNP A/B and hnRNP A2/B1 which have been shown to be associated with lincRNA-Cox2 function in gene regulation. 25584904