LncRNA Information
ID EL0541 Name Gm30731 Aliases Pnky; lnc-pou3f2
Species Mus musculus Chromosome 4 Start site 22490548
End site 22493126 Chain plus Exon NO. 3
Assembly Ensembl Release 89 Class lincRNA NCBI accession NR_131335
Ensembl ENSMUSG00000107859 Sequence

Function (not disease relevant)
Methods Sample/condition Expression pattern Dysfunction type Description PMID Source
knockdown neural stem cell (NSC) in the embryonic and postnatal brain N/A Interaction In NSCs, Pnky and PTBP1 regulate the expression and alternative splicing of a core set of transcripts that relates to the cellular phenotype. These data thus unveil Pnky as a conserved lncRNA that interacts with a key RNA processing factor and regulates neurogenesis from embryonic and postnatal NSC populations. 25800779

Interaction target Level of interaction Type of interaction Description PMID Source
PTBP1 RNA-Protein binding Pnky interacts with the splicing regulator PTBP1, and PTBP1 knockdown also enhances neurogenesis. 25800779