LncRNA Information
ID EL1375 Name TU1378 Aliases N/A
Species Ganoderma lucidum Chromosome N/A Start site N/A
End site N/A Chain N/A Exon NO. N/A
Assembly N/A Class lincRNA NCBI accession N/A
Ensembl N/A Sequence N/A

Function (not disease relevant)
Methods Sample/condition Expression pattern Dysfunction type Description PMID Source
RNA-seq, qRT-PCR mycelia stage up-regulated N/A The expression profiles of 5 lincRNAs were negatively correlated with those of their apcGenes (Figure 5B,r<-0.8). The apcGenes of TU718, TU1378, TU3327, and TU5007 are a putative hydrolase (GL15069), a Barwin-related endoglucanase (GL18494), a putative hydrolase (GL27846), and an alphaamylase (GL24914), respectively, which all belong to CAZy family. 24932683 PLNlncRbase

Interaction target Level of interaction Type of interaction Description PMID Source
GL18494 RNA-DNA regulation In the 16 lincRNA/apcGene pairs that showed significantly positive or negative correlation, 9 apcGenes are involved in wood degradation and 6 apcGenes belong to the CYP450 families, suggesting genes involved in these biological processes be potentially regulated by lincRNAs. 24932683 PLNlncRbase