LncRNA Information
ID EL1353 Name TPS11 Aliases N/A
Species Solanum lycopersicum Chromosome N/A Start site N/A
End site N/A Chain N/A Exon NO. N/A
Assembly N/A Class lincRNA NCBI accession N/A
Ensembl N/A Sequence N/A


Function (not disease relevant)
Methods Sample/condition Expression pattern Dysfunction type Description PMID Source
Northern blot/Southern blot roots up-regulated N/A This lncRNAs work as a decoy of miRNAs,and exert their functions by binding miRNAs in a target mimicry mechanism to sequestrate the miRNAs’ regulation roles on their target genes, such as lncRNAs IPS1 and at4. 23726911 PLNlncRbase
 


Interaction
Interaction target Level of interaction Type of interaction Description PMID Source
miR399 RNA-RNA binding IPS1 and At4 directly inhibits miR-399 activity.IPS1 has many family members in a number of plant species, including At4, At4–1, At4–2 and At4–3 in Arabidopsis thaliana, TPS11 in tomato, Mt4 in Barrel Clover and Alfalfa, Mt4-like in Soybean 23726911 PLNlncRbase