| LncRNA Information | ||||||
|---|---|---|---|---|---|---|
| ID | EL1352 | Name | TPS1 | Aliases | SlTPS1 | |
| Species | Solanum lycopersicum | Chromosome | 7 | Start site | 1300942 | |
| End site | 1304547 | Chain | plus | Exon NO. | 4 | |
| Assembly | SL2.50 | Class | lincRNA | NCBI accession | N/A | |
| Ensembl | N/A | Sequence | N/A | |||
| Function (not disease relevant) | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Methods | Sample/condition | Expression pattern | Dysfunction type | Description | PMID | Source | |||
| Northern blot/qRT-PCR | roots | up-regulated | N/A | INDUCED BY PHOSPHATE STARVATION1 is a member of the TPS1/Mt4 gene family that acts as a miR399 target mimic in fine tuning of PHO2 (encoding an E2 ubiquintin conjugase-related enzyme)expression and phosphate uptake in Arabidopsis, tomato and Medicago truncatula but does not encode a protein. | 24576388 | PLNlncRbase | |||
| Interaction | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Interaction target | Level of interaction | Type of interaction | Description | PMID | Source | ||||
| miR399 | RNA-RNA | binding | INDUCED BY PHOSPHATE STARVATION1 is a member of the TPS1/Mt4 gene family that acts as a miR399 target mimic in fine tuning of PHO2 (encoding an E2 ubiquintin conjugase-related enzyme) expression and phosphate uptake in Arabidopsis, tomato and Medicago truncatula but does not encode a protein | 24576388 | PLNlncRbase | ||||