LncRNA Information | ||||||
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ID | EL1292 | Name | TCONS_00032782 | Aliases | N/A | |
Species | Populus tomentosa | Chromosome | N/A | Start site | N/A | |
End site | N/A | Chain | N/A | Exon NO. | N/A | |
Assembly | N/A | Class | lincRNA | NCBI accession | N/A | |
Ensembl | N/A | Sequence | N/A |
Function (not disease relevant) | |||||||||
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Methods | Sample/condition | Expression pattern | Dysfunction type | Description | PMID | Source | |||
RNA-seq/qRT-PCR | wood formation | up-regulated | N/A | In our study, TCONS_00032782, which was predicted to target Pt-CSLD4, revealed that lncRNA might function in wood formation through regulation of CSLD in Populus. | 25230698 | PLNlncRbase | |||
Interaction | |||||||||
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Interaction target | Level of interaction | Type of interaction | Description | PMID | Source | ||||
Pt-CSLD4 | RNA-DNA | regulation | The lncRNA TCONS_00032782 was predicted to regulate POPTR_0013s07900.1 (Pt-CSLD4), which encodes a protein similar to cellulase synthase 3. | 25230698 | PLNlncRbase | ||||