INTERACTION |
ID |
lncRNA Name |
Interaction target |
Level of interaction |
Type of interaction |
Description |
PMID |
Source |
EL1243 |
SRG1 |
SER3 |
RNA-DNA |
binding |
Repression occurs by a transcription-interference mechanism in which srg1 transcription across the ser3 promoter interferes with the binding of activators. |
15175754 |
|
EL1243 |
SRG1 |
Cha4 |
RNA-Protein |
binding |
This regulation requires Cha4, a serine-dependent activator that binds to the SRG1 promoter and is required for SRG1 induction in the presence of serine. |
16291644 |
LncRNADisease
|
EL1243 |
SRG1 |
Cha4 |
DNA-Protein |
binding |
Srg1 transcription is regulated by serine. this regulation requires cha4, a serine-dependent activator that binds to the srg1 promoter and is required for srg1 induction in the presence of serine. |
16291644 |
|
EL1243 |
SRG1 |
SER3 |
RNA-DNA |
regulation |
Some cases, such as the SRG1 transcript in yeast that blocks activation of the SER3 gene, involve transcriptional regulation of a protein coding gene by an ncRNA. |
19191220 |
LncRNADisease
|
EL1243 |
SRG1 |
SER3 |
RNA-DNA |
regulation |
The 3' end of SRG1 contains regulatory elements within the SER3 promoter, and premature termination of SRG1 transcription prevents repression of SER3. |
19239885 |
LncRNADisease
|
EL1243 |
SRG1 |
Spt6 |
RNA-Protein |
regulation |
Repression by SRG1 transcription is dependent on the Spt6 and Spt16 transcription elongation factors. |
21156811 |
LncRNADisease
|
EL1243 |
SRG1 |
Spt2 |
RNA-Protein |
regulation |
We find that Spt2 and Spt6 are required for the repression of SER3 by SRG1 transcription. |
21220514 |
LncRNADisease
|
EL1243 |
SRG1 |
Spt6 |
RNA-Protein |
regulation |
We find that Spt2 and Spt6 are required for the repression of SER3 by SRG1 transcription. |
21220514 |
LncRNADisease
|
EL1243 |
SRG1 |
SER3 |
RNA-DNA |
regulation |
SRG1 transcription deposits nucleosomes over the SER3 promoter to prevent transcription factors from binding and activating SER3. |
21873510 |
LncRNADisease
|
|