INTERACTION
ID	lncRNA Name	Interaction target	Level of interaction	Type of interaction	Description	PMID	Source
EL0222	B2 SINE RNA	RNA polymerase II	DNA-DNA	regulation	Transposable B2 SINE elements can provide mobile RNA polymerase II promoters.	11326281	LncRNADisease
EL0222	B2 SINE RNA	CELO	DNA-TF	regulation	CELO protein Gam1 was able to mediate transcriptional activation of these B2 SINE-containing RNAs.	12729754	LncRNADisease
EL0222	B2 SINE RNA	Pol II	RNA-Protein	binding	B2 rna potently inhibits transcription by binding to core pol ii with high affinity and specificity.	15300239
EL0222	B2 SINE RNA	Pol II	RNA-Protein	binding	A small noncoding rna polymerase iii transcript, b2 rna, associates with rna polymerase ii and represses transcription of specific mrna genes.	15300240
EL0222	B2 SINE RNA	RNA polymerase II	RNA-Protein	binding	A 33-nt piece of B2 RNA binds RNA polymerase II, associates with preinitiation complexes, but cannot repress transcription.	17307818	LncRNADisease
EL0222	B2 SINE RNA	RNA polymerase II	RNA-Protein	binding	In vitro B2 RNA assembles into preinitiation complexes on promoter DNA via its interaction with the polymerase, thus rendering the complexes inactive.	17307818
EL0222	B2 SINE RNA	ALAS1	DNA-DNA	regulation	A B2 SINE can contribute to the regulation of ALAS1 and SINEs in 5'-UTR regions contribute to inter-individual differences in gene expression.	18929534	LncRNADisease
EL0222	B2 SINE RNA	actin	RNA-RNA	co-expression	Upon stress conditions such as heat shock, B2 expression is dramatically enhanced leading to repression of transcription for genes such as actin and hexokinase II.	19239885	LncRNADisease
EL0222	B2 SINE RNA	hexokinase II	RNA-RNA	co-expression	Upon stress conditions such as heat shock, B2 expression is dramatically enhanced leading to repression of transcription for genes such as actin and hexokinase II.	19239885	LncRNADisease
EL0222	B2 SINE RNA	Comt1	DNA-DNA	regulation	A B2 SINE insertion in the Comt1 gene (Comt1(B2i)) results in an overexpressing, behavior modifying allele present in classical inbred mouse strains.Comt1(B2i) (a B2 SINE insertion) results in a relatively modest difference in Comt1 expression and enzyme activity (comparable to the human Val-Met polymorphism) which has a demonstrable behavioral phenotype across a variety of outbred genetic backgrounds.	20618449	LncRNADisease
EL0222	B2 SINE RNA	Comt1	DNA-DNA	regulation	Comt1 is differentially expressed among the strains, and this differential expression is cis-regulated. A B2 short interspersed nuclear element (SINE) was inserted in the 3'-untranslated region (3'-UTR) of Comt1 in 14 strains generating a common haplotype that correlates with gene expression. A haplotype, defined by a 3'-UTR B2 SINE element, regulates Comt1 expression and some mouse behaviors.	20659173	LncRNADisease